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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTAGGATATGCCACAAGCTTACTGGCAAGCTGAAGAGGGAAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACGgtattatagtgtttaccttttcttcaaggtcaaatatgttgttccttatattgcaatttcccataaccgccctttcatattgtttttcgttttgtag

Basic information

species Glycine max
transcript GLYMA05G03970.1
intron # 21
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6845818|gb|AW348108.1|AW348108
EST:     AAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACG                         AAATTGAAGATGCTGACAGCACAGGAACTTTCATTGGATGATCTCCAGATA
genomic: AAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACGgtattatagt ... cgttttgtagAAATTGAAGATGCTGACAGCACAGGAACTTTCATTGGATGATCTCCAGATA
EST: gi|33388995|gb|CA852202.1|CA852202
EST:     AAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACG                         AAATTGAAGATGCTGACAGCACAGGAACTTTCATTGGATGATCTCCAGATA
genomic: AAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACGgtattatagt ... cgttttgtagAAATTGAAGATGCTGACAGCACAGGAACTTTCATTGGATGATCTCCAGATA
EST: gi|31310152|gb|CD395355.1|CD395355
EST:     AAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACG                         AAATTGAAGATGCTGACAGCACAGGAACTTTCATTGGATGATCTCCAGATA
genomic: AAGTTATACTAGGCTCGTCAAGTATTGATGATCCTGCACAATATATCACGgtattatagt ... cgttttgtagAAATTGAAGATGCTGACAGCACAGGAACTTTCATTGGATGATCTCCAGATA