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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTATGATTCCATATGGACATACTTCAGAGTTTATTATAATTGGTTCCAGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGGgtaagtagtctcatagttgctttgtttcgtatgaatgtatgtttatggatatggaataatttttggaggaattcttagatgcagttgtgtttttactcta...

Basic information

species Glycine max
transcript GLYMA10G31880.1
intron # 20
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208250826|gb|GE047793.1|GE047793
EST:     AGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGG                         TGCTAGAGACACTATTGTGCTCACTTTGAGATTATTCATCCGGAGGAGG
genomic: AGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGGgtaagtagtc ... ccttttgcagTGCTAGAGACACTATTGTGCTCACTTTGAGATTATTCATCCGGAGGAGG
EST: gi|207716967|gb|GD699533.1|GD699533
EST:     AGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGG                         TGCTAGAGACACTATTGTGCTCACTTTGAGATTATTCATCCGGAGGAGG
genomic: AGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGGgtaagtagtc ... ccttttgcagTGCTAGAGACACTATTGTGCTCACTTTGAGATTATTCATCCGGAGGAGG
EST: gi|208038932|gb|GD834608.1|GD834608
EST:     AGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGG                         TGCTAGAGACACTATTGTGCTCACTTTGAGATTATTCATCCGGAGGAGG
genomic: AGTGGTGCTGAACACCTTTTAAAAGCAGAAAACAACACAGATTTCAGTGGgtaagtagtc ... ccttttgcagTGCTAGAGACACTATTGTGCTCACTTTGAGATTATTCATCCGGAGGAGG