Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   		17  
 5'  3'   		18  
 5'  3'   		19  
 5'  3'   		20  
 5'  3'   
21  
 5'  3'   		22  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGAATGGGTCAAGTCCAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttacttgcttatagaaaattcagtacctttttattttatacttttatagtcaatgatgtttaaaccaaaagtagattatcttgactataggaca...

Basic information

species Glycine max
transcript GLYMA10G21350.1
intron # 20
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|24206274|gb|BU965527.1|BU965527
EST:     CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTG                         GCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
genomic: CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttac ... cttcttgcagGCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
EST: gi|33390214|gb|CA853421.1|CA853421
EST:     CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTG                         GCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
genomic: CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttac ... cttcttgcagGCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
EST: gi|208211527|gb|GE014030.1|GE014030
EST:     CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTG                         GCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
genomic: CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttac ... cttcttgcagGCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
EST: gi|16348583|gb|BI974178.1|BI974178
EST:     CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTG                         GCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
genomic: CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttac ... cttcttgcagGCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
EST: gi|9565885|gb|BE475394.1|BE475394
EST:     CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTG                         GCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
genomic: CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttac ... cttcttgcagGCACAAGATAGATTGAATGGGTTAGGCCAAGGGGGACCAAGGCAAAGGGCA
EST: gi|208059837|gb|GD859043.1|GD859043
EST:     CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTG                         GCACAAGATAGATTGAATGGGTTAGG
genomic: CTGCCTTATCTAATGCATTTGGTTCATCTTCTGAGAAAGCATCCGGTTTGgtatgcttac ... cttcttgcagGCACAAGATAGATTGAATGGGTTAGG