1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' |
TGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTgtaagcccctttttgtttccttattcattgttttatattcattttatgctcttggtaatagaagttgatggtattttttgaactgggcaaatctcttttg...
species | Glycine max |
transcript | GLYMA06G05900.3 |
intron # | 20 |
splice site | 5' |
intron type | U2 |
EST: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTT GAGACTAGAAAAGAACAAATTATCTGGGGATGTGTCTTCGCTTGCAAATTGEST: gi|192296635|gb|FG991203.1|FG991203
genomic: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTgtaagcccct ... aattctgcagGAGACTAGAAAAGAACAAATTATCTGGGGATGTGTCTTCGCTTGCAAATTG
EST: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTT GAGACTAGAAAAGAACAAATTATCTGGGGGATGTGTCTTCGCTTGCAAATTEST: gi|208110587|gb|GD910489.1|GD910489
genomic: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTgtaagcccct ... aattctgcagGAGACTAGAAAAGAACAAATTATCTGGGG-ATGTGTCTTCGCTTGCAAATT
EST: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTT GAGACTAGAAAAGAACAAATTATCCGGGGACGTGTCEST: gi|208071387|gb|GD872988.1|GD872988
genomic: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTgtaagcccct ... aattctgcagGAGACTAGAAAAGAACAAATTATCTGGGGATGTGTC
EST: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTT GAGACTAGAAAAGAACAAATTATCTAGGGGATGTGTACTTACGACTTGCAA
genomic: TCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTgtaagcccct ... aattctgcagGAGACTAGAAAAGAACAAATTATCT-GGGGATGTGT-CTT-CG-CTTGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAACATTATATCCTTgtaagcccctttttgtttccttattcattgttttatattcattttatgctcttggtaatagaagttgatggtattttttgaactgggcaaatctcttttg
- - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - TCAGCT