1 5' 3' | 2 5' 3' | 3 5' 3' |
AGTCATAGACAACATAAAATCTAAGTTGGAAGGCATGTGTAAAGGTGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtacttactaattactatctaattcaattgatcatattattatgatgaaattaaagaaagtgatgtaagaaaactttaactaattgtctcag
species | Glycine max |
transcript | GLYMA20G38590.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACAEST: gi|192327335|gb|FK017782.1|FK017782
genomic: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
EST: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACAEST: gi|192324513|gb|FK018699.1|FK018699
genomic: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
EST: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGGTTCAACCACAEST: gi|16345381|gb|BI970976.1|BI970976
genomic: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
EST: TCTTGTGCTGACANNNTNGCCGTTGCNGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACAEST: gi|8283080|gb|BE020641.1|BE020641
genomic: TCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
EST: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACAEST: gi|41145684|gb|CK605895.1|CK605895
genomic: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
EST: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACAEST: gi|33389957|gb|CA853164.1|CA853164
genomic: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
EST: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCT CTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
genomic: TCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtactt ... attgtctcagCTTGGTGGACAAAAATGGGAAGTACAAGTAGGCAGAAGAGATTCAACCACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTCATAGACAACATAAAATCTAAGTTGGAAGGCATGTGTAAAGGTGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTGTTGCTgtaagtacttactaattactatctaattcaattgatcatattattatgatgaaattaaagaaagtgatgtaagaaaactttaactaattgtctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT