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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCCGTGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGCTGgtgcgtttttctctcttccgatccatttcctcactcctttcgcttcgatctttcaatctccattcaattctgcgtttctcgatctcattgtttcgcccaa...

Basic information

species Glycine max
transcript GLYMA20G24070.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209701922|gb|BW664576.1|BW664576
EST:     TGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGCTG                         ATGGGTGTGGCTGAGAACATTCCCGATATGGAGGAGGGTACCTTGGAGATT
genomic: TGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGCTGgtgcgttttt ... aagttccaagATGGGTGTGGCTGAGAACATTCCCGATATGGAGGAGGGTACCTTGGAGATT
EST: gi|209713872|gb|BW684065.1|BW684065
EST:     TGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGCTGTTCCAAG                   
genomic: TGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGC---T----Ggtgcgttttt ... aagt
EST: gi|209698692|gb|BW656517.1|BW656517
EST:     TGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGCTGTTCCAAG                   
genomic: TGTTCTTCACCCACGTCTCTCTCCCGCTTCAGATCGTAAACGTCTCGC---T----Ggtgcgttttt ... aagt