Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|208312045|gb|GE109869.1|GE109869EST: GCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCAT ATTTTATGTGGATGATGTTCCTATTAGGGAAGTTAAGAGAACAGAATCTAT
genomic: GCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCATgtatgtatga ... tcttgtgcagATTTTATGTGGATGATGTTCCTATTAGGGAAGTTAAGAGAACAGAATCTAT
EST:
gi|208283894|gb|GE088586.1|GE088586EST: GCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCAT ATTTTATGTGGATGATGTTCCTA
genomic: GCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCATgtatgtatga ... tcttgtgcagATTTTATGTGGATGATGTTCCTA
EST:
gi|193541306|gb|FK498778.1|FK498778EST: GCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCAT ATTTTATGTGGATGATGTTCCTATTAGGGAAGTTAAGAGAACAGAATCTAT
genomic: GCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCATgtatgtatga ... tcttgtgcagATTTTATGTGGATGATGTTCCTATTAGGGAAGTTAAGAGAACAGAATCTAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAAGCACCAGCATTGGTAGAGAGGAAAGATATGGCTTATGGTTTGATCCTGCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCATgtatgtatgatgcaatctatttgaatcccacatgccatatttggttattacattttccttgttatggtaaaactagtttcttcaactgttctattattgc
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA