1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATATGTCACTCGCACTTCTGCTTTAGAGTATGAAGACTTCAATTCCGCTAAGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGgcaacttccaactctcgctgcactctaattttcttttctttcctcactctcttgcccattttcctttctttctttttgcag
species | Glycine max |
transcript | GLYMA19G45180.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAG GCCCGCAAAGTTATEST: gi|10847206|gb|BF071500.1|BF071500
genomic: AGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGgcaacttcca ... ctttttgcagGCCCGCAAAGTTAT
EST: AGTCTCGCTTGATCGAACGTGCTGAGAAGTNTGGGGAAATCTCCTACAAG GCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGCTGTEST: gi|6135022|gb|AW133415.1|AW133415
genomic: AGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGgcaacttcca ... ctttttgcagGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGCTGT
EST: AGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAG GCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATGTGATGGCTGT
genomic: AGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGgcaacttcca ... ctttttgcagGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGCTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGTCACTCGCACTTCTGCTTTAGAGTATGAAGACTTCAATTCCGCTAAGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGgcaacttccaactctcgctgcactctaattttcttttctttcctcactctcttgcccattttcctttctttctttttgcag
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