1 5' 3' | 2 5' 3' | 3 5' 3' |
ACGAGGGCAAATTGATTGATCTTCTCAACGGCTCTGATTACGTACCAACCTGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtctttatcattaatttgctttaattttctctaagcacacaccacctgtttcattttaattaaacattactaatatggatatataattccacag
species | Glycine max |
transcript | GLYMA19G43450.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGA AATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGCEST: gi|192306533|gb|FG997217.1|FG997217
genomic: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtcttt ... aattccacagAATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGC
EST: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGTCGTACCTTGGGA AATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGCEST: gi|254318334|gb|GR832502.1|GR832502
genomic: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtcttt ... aattccacagAATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGC
EST: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGA AATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGCEST: gi|192306534|gb|FG997218.1|FG997218
genomic: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtcttt ... aattccacagAATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGC
EST: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGTCGTACCTTGGGA AATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATTTGCGGCEST: gi|57575143|gb|CX548118.1|CX548118
genomic: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtcttt ... aattccacagAATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGC
EST: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGA AATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGC
genomic: TGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtcttt ... aattccacagAATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGAGGGCAAATTGATTGATCTTCTCAACGGCTCTGATTACGTACCAACCTGTGAAGACAAAGATGGTGATTGGATGCTCGTGGGTGACGTACCTTGGGAgtaagtctttatcattaatttgctttaattttctctaagcacacaccacctgtttcattttaattaaacattactaatatggatatataattccacag
- - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG