Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192323728|gb|FK016034.1|FK016034EST: CAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAG ATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAA
genomic: CAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGgtaaatctat ... tctttctcagATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAA
EST:
gi|192331563|gb|FK019952.1|FK019952EST: CAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAG ATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAA
genomic: CAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGgtaaatctat ... tctttctcagATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAA
EST:
gi|23064340|gb|BU579113.1|BU579113EST: CAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAG ATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAA
genomic: CAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGgtaaatctat ... tctttctcagATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTAGGTGGATCAATTACTTAAGGCCTGATTTGAAGAGAGGTACATTCTCACAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGgtaaatctattcatgatttttaatctctggctctcggcccagtgatacctgaccgttgaaaaaagaagaagaagaaaactattacatttttcttgtgattgggtcatcctagatatcttgacatagatgttctttttctttccttttctttctcag
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA