Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTTTGGGGACGAAATTCTTCTTGAAAATGGAGAAGTCAATAGACCCAGGCTTGGCCAAATTGTCTTCTCCGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataatttccctttcatttagttgcatttggatagattattgaatttctctttttgagtttgggttatgatgttgttttag

Basic information

species Glycine max
transcript GLYMA19G39680.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151408092|gb|EV277900.1|EV277900
EST:     CTTGGCCAAATTGTCTTCTCCGATCCGGATAAGCGTCAATTTCTCAACCG                         ATTGCTAGCTCCTTACATATCACGTGGGATATTTTGGAAGGTTTTGAAGCT
genomic: CTTGGCCAAATTGTCTTCTCCGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTAGCTCCTTACATATCACGTGGGATATTTTGGAAGGTTTTGAAGCT
EST: gi|213610553|gb|DB960606.1|DB960606
EST:     CTTGGCCAAATTGTCTTCTCCGATCCGGATAAGCGTCAATTTCTCAACCG                         ATTGCTAGCTCCTTACATATCACGTGGGATATTTTGGAAGGTTTTGAAGCT
genomic: CTTGGCCAAATTGTCTTCTCCGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTAGCTCCTTACATATCACGTGGGATATTTTGGAAGGTTTTGAAGCT
EST: gi|192333768|gb|FK025827.1|FK025827
EST:     CTTGGCCAAATTGTCATCTCCGATCCGGATAAGCGTCAATTTCTCAACCG                         ATTGCTAGCTCCTTACATATCACGTGGGATATTTTGGAAGGTTTTGAAGCT
genomic: CTTGGCCAAATTGTCTTCTCCGATCCGGATAAGCGTCAATTTCTCAACCGgtattcataa ... gttgttttagATTGCTAGCTCCTTACATATCACGTGGGATATTTTGGAAGGTTTTGAAGCT