1 5' 3' | 2 5' 3' | 3 5' 3' |
GTACATGGATAAGAAGCTTCAGAgtaagtctgattctctatttgttgcttctcttatctgtatctgaacgtgttcgtgtttttttttatataaaaaaaacccattagttttttcgagctggag...
species | Glycine max |
transcript | GLYMA19G38130.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAGTACATGGATAAGAAGCTTCAGA TCAAGCTGAACGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTTGACCEST: gi|208259172|gb|GE055450.1|GE055450
genomic: AAGTACATGGATAAGAAGCTTCAGAgtaagtctga ... tttcttgcagTCAAGCTGAACGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTTGACC
EST: CATGGATAAGAAGCTTCAGA TCAAGCTGAACGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTTGACC
genomic: CATGGATAAGAAGCTTCAGAgtaagtctga ... tttcttgcagTCAAGCTGAACGCAAATCGCATGGTTGTTGGTACTCTCCGTGGCTTTGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACATGGATAAGAAGCTTCAGAgtaagtctgattctctatttgttgcttctcttatctgtatctgaacgtgttcgtgtttttttttatataaaaaaaacccattagttttttcgagctggag
- CATGGA
- - - - - AAGAAG
- - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaaa