1 5' 3' | 2 5' 3' | 3 5' 3' |
TTCGAGGACGACGAAGAAGGGCATGGAAACGGTGATGAAGAAGAAGAGGAAGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAgtatgttgtcacacacagcttagtatttatttttgtaccatttcttttgtttgttgttgtgtggtcgttttccaccaacgcaccatcgtacacgcttctt...
species | Glycine max |
transcript | GLYMA19G37680.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGA GAGCCAAGCAGCAGTTATTGTATAAGCTTCGTAGATTTGAGAAACTGGCGGEST: gi|208207663|gb|GE007584.1|GE007584
genomic: AGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAgtatgttgtc ... aattttacagGAGCCAAGCAGCAGTTATTGTATAAGCTTCGTAGATTTGAGAAACTGGCGG
EST: AGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGA GAGCCAAGCAGCAGTTATTGTATAAGCTTCGTAGATTTGAGAAACTGGCGG
genomic: AGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAgtatgttgtc ... aattttacagGAGCCAAGCAGCAGTTATTGTATAAGCTTCGTAGATTTGAGAAACTGGCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCGAGGACGACGAAGAAGGGCATGGAAACGGTGATGAAGAAGAAGAGGAAGAGGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAgtatgttgtcacacacagcttagtatttatttttgtaccatttcttttgtttgttgttgtgtggtcgttttccaccaacgcaccatcgtacacgcttctt
- - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT