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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACGAGTGGACGTAATGAAGCTCGACCTTTGCTCAGTGAATTCTATTACATCATTTGTGGACAACTTCATAGCTCTTGATCTTCCTCTCAACATTTTAATgttggttttcttgtttaattacttgcaaacacactctttttaatacattctctattaatactattagtgtaaatttattgaaaatataaaattacggctg...

Basic information

species Glycine max
transcript GLYMA19G35630.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7234016|gb|AW569357.1|AW569357
EST:     TCCTCTCAACATTTTAAT                         AAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCAT
genomic: TCCTCTCAACATTTTAATgttggttttc ... ttcatgtcagAAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCAT
EST: gi|7029898|gb|AW459681.1|AW459681
EST:     TCCTCTCAACATTTTAAT                         AAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCAT
genomic: TCCTCTCAACATTTTAATgttggttttc ... ttcatgtcagAAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCAT
EST: gi|5605831|gb|AI899929.1|AI899929
EST:     TCTCAACATTTTAAT                         AAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCAT
genomic: TCTCAACATTTTAATgttggttttc ... ttcatgtcagAAACAATGCTGGAGTAATGTTCTGCCCATTCAAGCTCTCAGAGGATGGCAT