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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAGAAAAAGGAAACTGAATATATGCGTCTTCAAAGGCACAAAATGGGTGTCGACGATTTTGAGTTATTAACTATGATTGGAAAAGGTGCATTTGGGGAGgtatgtgtattttgtctattaactatttgttctttttgttttaaaacagtttatgtctttgcccattaatggtttcactttacatacaattttaaattgttttag

Basic information

species Glycine max
transcript GLYMA19G34920.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G34920.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv07s0005g03690.t01 (Vitis vinifera), 5'ss of exon 2
AGAGAAAAAGGAAACTGAATATATGCGTCTTCAAAGGCACAAAATGGGTGTCGACGATTTTGAGTTATTAACTATGATTGGAAAAGGTGCATTTGGGGAGgtatgtgtattttgtctatta-actatttgttctttttgttttaaaacagtttatgtctttgcccattaatggtttcactttacatacaattttaaattgttttag
 ||||| |||||||||||||| ||||| ||||||||||| || |||||||  || |||||||| ||||| || ||||| || || || |||||||| |||||||   | | |     |||| |||  |   | |||     ||     | | |   |  ||  |||||  ||||||||   | ||||    |     | | |    
GGAGAAGAAGGAAACTGAATACATGCGCCTTCAAAGGCATAAGATGGGTGCTGATGATTTTGAATTATTGACGATGATCGGGAAGGGAGCATTTGGAGAGgtatacatttatgtgaaattatactggtctctttttccaaatttcttaattcttaattcttttccatt--tggtttcaagcttcataatcatgcttctagct----