1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGTGAACTGAGATGGCTGGAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagctttagcccctctcttcatggcaagtttatttgttttggaatatttacttttctgatccttgttgcatgagacttaaattggagacccttagacc...
species | Glycine max |
transcript | GLYMA19G22530.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCT AATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCTEST: gi|192323087|gb|FK017373.1|FK017373
genomic: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagcttta ... cttgttgcagAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
EST: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCT AATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCTEST: gi|13181463|gb|BG352803.1|BG352803
genomic: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagcttta ... cttgttgcagAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
EST: GAGGTGTTATTCGGCAG-TATTTAAGAGGAAACTCCAATCTCATTCTCCT AATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCTEST: gi|151402509|gb|EV272322.1|EV272322
genomic: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagcttta ... cttgttgcagAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
EST: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCT AATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCTEST: gi|18692685|gb|BM521533.1|BM521533
genomic: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagcttta ... cttgttgcagAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
EST: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCT AATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCTEST: gi|192306980|gb|FG999985.1|FG999985
genomic: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagcttta ... cttgttgcagAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
EST: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCT AATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
genomic: GAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagcttta ... cttgttgcagAATTCTTCTTTTAAGTCATCCATTATCACAAAGAAAGATGGTGCTGACTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGAACTGAGATGGCTGGAGGTGTTATTCGGCAGTTATTTAGGAGGAAACTCCAATCTCATTCTCCTgtaagctttagcccctctcttcatggcaagtttatttgttttggaatatttacttttctgatccttgttgcatgagacttaaattggagacccttagacc
- - - - - - - - - - - - - - - - - - - - - GGAGGA