1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTTGAGTTTTGATGATTTTGAAGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcatgtttcccatttccttgcctcttcccccttttgtttcctttcctcttcttggcccatggaagggtaatgctgtgtcttgtgttatgtgttg...
species | Glycine max |
transcript | GLYMA19G04340.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATTEST: gi|151413162|gb|EV282970.1|EV282970
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATTEST: gi|192330619|gb|FK022274.1|FK022274
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATTEST: gi|151395300|gb|EV265171.1|EV265171
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATCEST: gi|151408574|gb|EV278382.1|EV278382
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATTEST: gi|213590172|gb|DB963791.1|DB963791
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATTEST: gi|213589356|gb|DB961689.1|DB961689
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
EST: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTG TATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
genomic: ATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcat ... catatttcagTATTCGTCAATATTCCGTAGAGGGGATGCTCATTCAATTCCTTCGTCTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGAGTTTTGATGATTTTGAAGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTGCGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGgtatgttcatgtttcccatttccttgcctcttcccccttttgtttcctttcctcttcttggcccatggaagggtaatgctgtgtcttgtgttatgtgttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctcttc
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