Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTGTTTAGGTAGGCGGTTGGGACCAAAGCTTCTTGGTAGGGTTGATGATCCGGCGgtaaataatttttttgttacttcaaatagatatctgattatgtcatatctactaaagatttgattaattaactattatctgaacctttcttgtgatgattgtaatgttgcag

Basic information

species Glycine max
transcript GLYMA19G03460.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G03460.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv14s0108g01520.t01 (Vitis vinifera), 5'ss of exon 2
ATTGTTTAGGTAGGCGGTTGGGACCAAAGCTTCTTGGTAGGGTTGATGATCCGGCGgtaaataatttttttgttacttcaaatagatatc----------tgattatgtcatatctactaaagatttgattaatt-----aactattatctgaacctttcttg-----------tgatgattgtaatgttgcag
||||| |||| |||||||||||||||| |||||||||| | |  |||||| | | |||||||  | | ||| |    ||   ||||| |           |||| ||| |   |  | ||    |||  ||  ||     || |||||| ||     || ||            | ||| |  |  || |||||
ATTGTCTAGGCAGGCGGTTGGGACCAAGGCTTCTTGGTCGAGCAGATGATTCAGGGgtaaattttgtctttttcttatcctgtagatgttatttttagattgataatgcccgtttgattagttttttttttctttggtggaaatattatttgtgttgttatttaagccaattcctcatggtgatggtgctgcag