1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGATTCTGGCTTAGAGGATGCCTCAGGCTCGGCGTTCACCAATACGGAAGTGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccgactcagtttcaattcttcttgtcgtgtctgtagaaggcaataaaacataactgaacacacaaaaagaaggcaaaagaaacctatatcata...
species | Glycine max |
transcript | GLYMA18G48800.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGG AAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGGEST: gi|298192135|gb|HO036217.1|HO036217
genomic: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccg ... accattcaggAAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGG
EST: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGG AAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGGEST: gi|192323102|gb|FK018933.1|FK018933
genomic: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccg ... accattcaggAAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGG
EST: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGG AAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGGEST: gi|298198650|gb|HO040189.1|HO040189
genomic: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccg ... accattcaggAAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGG
EST: TGGAATCGCCTATGTGCGATGGTGATCAAAGTAAGACTTCTCTATGTAGG AAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGGEST: gi|151394415|gb|EV264286.1|EV264286
genomic: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccg ... accattcaggAAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGG
EST: TGGAATCGCCTATGTGTGTTGGTGATCAAAGTAAGACTTCTCTATGTAGG AAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGG
genomic: TGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccg ... accattcaggAAGAACAAGACGACAACATCACATTGGAGGAGGTTCATTCACCCTGTTAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATTCTGGCTTAGAGGATGCCTCAGGCTCGGCGTTCACCAATACGGAAGTGGAATCGCCTATGTGTGATGGTGATCAAAGTAAGACTTCTCTATGTAGGtatgtttccgactcagtttcaattcttcttgtcgtgtctgtagaaggcaataaaacataactgaacacacaaaaagaaggcaaaagaaacctatatcata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaaa