1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAATTAGTGTTGACATTGATCTCAAGATAGTTGGTTTTGTTATATGGGTTGGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGGtacatttattagggcttacaaattcttgacaaattgagtaattgatggtttattcataacactagcagtgttcatcgtgttgcatagacccaaagaagtt...
species | Glycine max |
transcript | GLYMA18G48220.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGA GGGCAATGATTCAGACTCAGTAGCACTGACAGCCAACTTCATATTTGTTGCEST: gi|120491027|gb|EH219194.1|EH219194
genomic: GGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGGtacatttatt ... tatgtgcagaGGGCAATGATTCAGACTCAGTAGCACTGACAGCCAACTTCATATTTGTTGC
EST: GGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGA GGGCAATGATTCAGACTCAGTAGCACTGACAGCCAACTTCATATTTGTTGCEST: gi|254328240|gb|GR835205.1|GR835205
genomic: GGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGGtacatttatt ... tatgtgcagaGGGCAATGATTCAGACTCAGTAGCACTGACAGCCAACTTCATATTTGTTGC
EST: GGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGA GGGCAATGATTCAGACTCAGTAGCACTGACAGCCAACTTCATATTTGTTGC
genomic: GGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGGtacatttatt ... tatgtgcagaGGGCAATGATTCAGACTCAGTAGCACTGACAGCCAACTTCATATTTGTTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATTAGTGTTGACATTGATCTCAAGATAGTTGGTTTTGTTATATGGGTTGGGCACTCTTCAATAGAGATTCAACTGGAGGTTACTCAGTCCAATGAAGGtacatttattagggcttacaaattcttgacaaattgagtaattgatggtttattcataacactagcagtgttcatcgtgttgcatagacccaaagaagtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG