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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTGCATACCATGACTACCATCACTACGTTGGTGGAAAAAGTCAAAGCAACTTTGCCTCAGTATTTACCTATTGTGACTACATTTACGGGACCCATAAGgtaagcttcatctttttaaataattggtttaagcattattagttacaaattatgatattaatatctgctattctacttttaataaataattaaaaataattcataggaattattcaatgtttctgcaaaaagatggctcactataacgaggctactataccctactttgcag

Basic information

species Glycine max
transcript GLYMA18G45280.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA18G45280.1 (Glycine max), 5'ss of exon 2
lower sequence: GRMZM2G062531_T01 (Zea mays), 5'ss of exon 3
GCCTGCATACCATGACTACCATCACTACGTTGGTGGAAAAAGTCAAAGCAACTTTGCCTCAGTATTTACCTATTGTGACTACATTTACGGGACCCATAAGgtaagcttcatctttttaaataattggtttaagcattattagttacaaattatgatattaatatctgctattctacttttaataaat-aattaaaaataattcataggaattattcaatgtttctgcaaaaagatggctcactataacgaggctactataccctactttgcag
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GGCTGCATACCATGACTACCATCACTATGCAGGAGGCCGTAGCCAAAGCAACTTTGCACCCCTGTTCACCTACTGTGATTATTTATATAGGACAGACAAAgtaagt---acatgcttgcttagcttaattatatactgt--gttaacacatatactctctatatt--cttttttatttgtcgtgtttcagtaaaaaatgaactaaat------------------------------------------------------------------