Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|51341464|gb|CO982781.1|CO982781EST: TGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCAAGATTACTGG GAAACCTGGGCTGGGCCTATATGCAAAAGATGAACTACATGATGGCTGAGG
genomic: TGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCAAGATTACTGGtatttgatct ... attgtacaggGAAACCTGGGCTGGGCCTATATGCAAAAGATGAACTACATGATGGCTGAGG
EST:
gi|9203956|gb|BE330180.1|BE330180EST: TGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCAAGATTACTGG GAAACCTGGGCTGGGCCTATATGCAAAAGATGAACTACATGATGGCTGAGG
genomic: TGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCAAGATTACTGGtatttgatct ... attgtacaggGAAACCTGGGCTGGGCCTATATGCAAAAGATGAACTACATGATGGCTGAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TACCAAGGTGAGGCCTTCAATGGGAAACTCACCAAGACAGCAAGGTCTCATGGCAAGAAGTTCCAAGTTTCTATCAAACAAGAAACTTCAAGATTACTGGtatttgatcttgactaaagctttttcttttactaaagttcaacgactagtcaagaagttatgctttttcctttgctgaaagttagcttaaggattgactt
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA