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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATACggtatgtgtgcttatcctaattggcattctacaaaagcttatccaatgaggcttgggtccatttttatttattttgaaattgactacactttgtgcatgca

Basic information

species Glycine max
transcript GLYMA18G13700.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151394940|gb|EV264811.1|EV264811
EST:     GCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATAC                         GTGTGGTGCAGAAGAACCGATGAACTAGTGGATGGACCTAATGCTTCTCAC
genomic: GCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATACggtatgtgtg ... tgtgcatgcaGTGTGGTGCAGAAGAACCGATGAACTAGTGGATGGACCTAATGCTTCTCAC
EST: gi|151402482|gb|EV272295.1|EV272295
EST:     GCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATAC                         GTGTGGTGCAGAAGAACCGATGAACTAGTGGATGGACCTAATGCTTCTCAC
genomic: GCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATACggtatgtgtg ... tgtgcatgcaGTGTGGTGCAGAAGAACCGATGAACTAGTGGATGGACCTAATGCTTCTCAC
EST: gi|192299424|gb|FG988737.1|FG988737
EST:     GCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATAC                         GTGTGGTGCAGAAGAACCGATGAACTAGTGGATGGACCTAATGCTTCTCAC
genomic: GCACACAATTGATGACCCAAGAGCGCAGAAAAGCCATCTGGGCCATATACggtatgtgtg ... tgtgcatgcaGTGTGGTGCAGAAGAACCGATGAACTAGTGGATGGACCTAATGCTTCTCAC