1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCAggtaattttttataactacttcccctatttgtttcttactggttgattggaatatttgtgtgaattcacattcttcaaaacttctctgtttatatatcat...
species | Glycine max |
transcript | GLYMA18G08370.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCA GCCAAGATACCCTTTCCATTGACACAEST: gi|58018272|gb|CX705014.1|CX705014
genomic: GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCAggtaattttt ... ttcatgcacaGCCAAGATACCCTTTCCATTGACACA
EST: AGACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCA GCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAATEST: gi|209715079|gb|BW677122.1|BW677122
genomic: AGACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCAggtaattttt ... ttcatgcacaGCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAAT
EST: GATTTGTAGCA GCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAATEST: gi|17518879|gb|BM187921.1|BM187921
genomic: GATTTGTAGCAggtaattttt ... ttcatgcacaGCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAAT
EST: GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCA GCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAATEST: gi|209729539|gb|BW651866.1|BW651866
genomic: GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCAggtaattttt ... ttcatgcacaGCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAAT
EST: GACTC-TACTTTTGCTGGGGTG-ACTTTTTCTTTTCTGGA-TTGTAGCA GCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAAT
genomic: GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCAggtaattttt ... ttcatgcacaGCCAAGATACCCTTTCCATTGACACAGAGGTTTAGGTCAATGCTACAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACTCTTACTTTTGCTTGGGTGAACTTTTTCTTTTCTGGATTTGTAGCAggtaattttttataactacttcccctatttgtttcttactggttgattggaatatttgtgtgaattcacattcttcaaaacttctctgtttatatatcat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttcccc