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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGAAACTCGAGGAATTCGCGCATGGCGCCTCCAATCCTCTCGCTCGCTCTTCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctcttcagcattttttttacctcgattgcatcaaatattcgtttaacgtgtcgccgattgaatgtcgaaatgaagaataataaactgcaatgttg...

Basic information

species Glycine max
transcript GLYMA18G04360.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151401899|gb|EV271712.1|EV271712
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|192332257|gb|FK023906.1|FK023906
EST:     TCCCTCGAACACCGGTCGAGCTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|298186757|gb|HO037390.1|HO037390
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|213600856|gb|DB958434.1|DB958434
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|7684914|gb|AW755562.1|AW755562
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|27423806|gb|CA935326.1|CA935326
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|298188142|gb|HO032099.1|HO032099
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
EST: gi|213588703|gb|DB957697.1|DB957697
EST:     TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGG                         GGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG
genomic: TCCCTCGAACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGtttttctctt ... tattctcaggGGTATGTTGGTAATAAATCCGCTGTCTTCCCTCTGCAACTACTGGGATATG