1 5' 3' | 2 5' 3' |
GGAAGAAGTCTTAGAAGCAACTCAACCCCCAGAATTCCAGCGCTGTATGGTGCCATTATTTCGTCGCATTGCACGTTGTTTGAATAGCCCTCATTTTCAGgtatgaattcttcgatacttttctctggctccttttctgtttctcctcttatttcatgagggaaatacacctgactttcaaactaattctctctggcaac...
species | Glycine max |
transcript | GLYMA18G01400.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCCATTATTTCGTCGCATTGCACGTTGTTTGAATAGCCCTCATTTTCAG GTGGCAGAAAGAGCCTTGTTCTTGTGGAACAATGATCACATCATGAACTTGEST: gi|254339952|gb|GR858077.1|GR858077
genomic: TGCCATTATTTCGTCGCATTGCACGTTGTTTGAATAGCCCTCATTTTCAGgtatgaattc ... tttccctcagGTGGCAGAAAGAGCCTTGTTCTTGTGGAACAATGATCACATCATGAACTTG
EST: TGCCATTATTTCGTCGCATTGCACGTTGTTTGAATAGCCCTCATTTTCAG GTGGCAGAAAGAGCCTTGTTCTTGTGGAACAATGATCACATCATGAACTTG
genomic: TGCCATTATTTCGTCGCATTGCACGTTGTTTGAATAGCCCTCATTTTCAGgtatgaattc ... tttccctcagGTGGCAGAAAGAGCCTTGTTCTTGTGGAACAATGATCACATCATGAACTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAGAAGTCTTAGAAGCAACTCAACCCCCAGAATTCCAGCGCTGTATGGTGCCATTATTTCGTCGCATTGCACGTTGTTTGAATAGCCCTCATTTTCAGgtatgaattcttcgatacttttctctggctccttttctgtttctcctcttatttcatgagggaaatacacctgactttcaaactaattctctctggcaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttctcctc