1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTTCCATCAGTCAGATAGTGCTGCATCTGATAACTCATTTGTGGCAGAAATCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAGgttagaggattttgttttccttgagttgctttcattaagttgtttacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatctggatctcatgtatttactcaattctag
species | Glycine max |
transcript | GLYMA17G31990.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAG GAAGAGGAAGTTAAAATATCAGATCAAACAAAGTAATCAAGAGCACCAAAGEST: gi|12691311|gb|BG157647.1|BG157647
genomic: TCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAGgttagaggat ... tcaattctagGAAGAGGAAGTTAAAATATCAGATCAAACAAAGCAATCAAGAGCACCAAAG
EST: TCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAG GAAGAAGGAGGTTAAAATATCAGATCAAACAAAGCAATCAAGAGCACCAAA
genomic: TCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAGgttagaggat ... tcaattctagGAAGA-GGAAGTTAAAATATCAGATCAAACAAAGCAATCAAGAGCACCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCCATCAGTCAGATAGTGCTGCATCTGATAACTCATTTGTGGCAGAAATCAAAGAATCAAATGACAACATTGATGGCACTAATATGACCATTCCTAAGgttagaggattttgttttccttgagttgctttcattaagttgtttacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatctggatctcatgtatttactcaattctag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA