1 5' 3' | 2 5' 3' | 3 5' 3' |
TTCTGGAAATACTGGGATGCGCCCAGATCTCATTATCAATCCTCATGCATTTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGgtactacgactaaacaatcgcatgaagattatctatacaacaaaagccttatgcatgaagattatcatataagttatcaatttttatttgatttgacgta...
species | Glycine max |
transcript | GLYMA17G23500.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAG GGAGGTAGCTTGCGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCAEST: gi|6482290|gb|AW201561.1|AW201561
genomic: TTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGgtactacgac ... ctttttgcagGGAGGTAGCTTGCGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCA
EST: TTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAG GGAGGTAGCTTGCGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCA
genomic: TTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGgtactacgac ... ctttttgcagGGAGGTAGCTTGCGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCTGGAAATACTGGGATGCGCCCAGATCTCATTATCAATCCTCATGCATTTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGgtactacgactaaacaatcgcatgaagattatctatacaacaaaagccttatgcatgaagattatcatataagttatcaatttttatttgatttgacgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT