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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATTGTGGAAAACAAGTGTATCTAGgtaaagttgattaataacaataattgtatatgtgtttgtgtgaactgtggcagttatttttcctaatattgttttaagaggctaaaacggtttttttttt...

Basic information

species Glycine max
transcript GLYMA17G18640.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120494213|gb|EH222380.1|EH222380
EST:     GGATTGTGGAAAACAAGTGTATCTAG                         GTGGATTTGACACAGCACATGCGGCTGCTCG
genomic: GGATTGTGGAAAACAAGTGTATCTAGgtaaagttga ... atttgtctagGTGGATTTGACACAGCACATGCGGCTGCTCG
EST: gi|208336300|gb|GE138694.1|GE138694
EST:     GGATTGTGGAAAACAAGTGTATCTAG                         GTGGATTTGACACAGCACATGCGGCTGCTCG
genomic: GGATTGTGGAAAACAAGTGTATCTAGgtaaagttga ... atttgtctagGTGGATTTGACACAGCACATGCGGCTGCTCG
EST: gi|208054805|gb|GD852794.1|GD852794
EST:     GGATTGTGGAAAACAAGTGTATCTAG                         GTGGATTTGACACAGCACATGCGGCTGCTCG
genomic: GGATTGTGGAAAACAAGTGTATCTAGgtaaagttga ... atttgtctagGTGGATTTGACACAGCACATGCGGCTGCTCG