1 5' 3' | 2 5' 3' | 3 5' 3' |
ATTTTGGCCTCTACTTCTACCACAACCACTCAGCATTCCGGCGCACTCAAGGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAGgtaagtaagcactatgctatgcagtcataacacgagccaaagaacaaagctactcttgttagtaatttcatatgttttaggcttttagcagaggctagaa...
species | Glycine max |
transcript | GLYMA17G13740.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAG GGAAGCTAAGATATGGAACAGCGTGTTTEST: gi|207757727|gb|GD728669.1|GD728669
genomic: GGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAGgtaagtaagc ... tgactgacagGGAAGCTAAGATATGGAACAGCGTGTTT
EST: GGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAG GGAAGCTAAGATATGGAACAGCGTGTTTGAGAAGGCTGAGGATGTAGTAGGEST: gi|7042033|gb|AW471927.1|AW471927
genomic: GGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAGgtaagtaagc ... tgactgacagGGAAGCTAAGATATGGAACAGCGTGTTTGAGAAGGCTGAGGATGTAGTAGG
EST: GGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAG GGAAGCTAAGATATGGAACAGCGTGTTTGAGAAGGCTGAGGATGTAGTAGG
genomic: GGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAGgtaagtaagc ... tgactgacagGGAAGCTAAGATATGGAACAGCGTGTTTGAGAAGGCTGAGGATGTAGTAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTTTGGCCTCTACTTCTACCACAACCACTCAGCATTCCGGCGCACTCAAGGTGCCGGCTTTGGCCCTTTCTTTTATCTCCCCAAAATGGAGCATTCAAGgtaagtaagcactatgctatgcagtcataacacgagccaaagaacaaagctactcttgttagtaatttcatatgttttaggcttttagcagaggctagaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA