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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGTTCGTATGTGATCAACTGTTGAAAGATGTTTGACTGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAGgtatccaatatattttcattgtaaagttatggtagagatatgaaggagaagatagtgatgctaataatatttatttgcatgttcttagcttgtgtaagtt...

Basic information

species Glycine max
transcript GLYMA17G08120.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193447024|gb|FK413695.1|FK413695
EST:     TGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAG                         GTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTAT
genomic: TGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAGgtatccaata ... taatttctagGTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTAT
EST: gi|193661366|gb|FK601704.1|FK601704
EST:     TGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAG                         GTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTAT
genomic: TGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAGgtatccaata ... taatttctagGTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTAT
EST: gi|213617203|gb|DB963766.1|DB963766
EST:     TGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAG                         GTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTAT
genomic: TGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAGgtatccaata ... taatttctagGTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTAT