1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATAGAGCCTATCTTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgttaatagacattttattttcatttttttaaaattaacatattcgactgttcttttgtttattttgatttaatcatttttttcttccagtttag...
species | Glycine max |
transcript | GLYMA17G05530.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTTTGATTTGAGTTCATGCCGCAGTGT TTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCTEST: gi|14126550|gb|BG790988.1|BG790988
genomic: CTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgtta ... ggatatgcagTTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCT
EST: TTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGT TTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCTEST: gi|7639266|gb|AW733592.1|AW733592
genomic: TTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgtta ... ggatatgcagTTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCT
EST: TTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGT TTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCTEST: gi|208338601|gb|GE135731.1|GE135731
genomic: TTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgtta ... ggatatgcagTTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCT
EST: GAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGT TTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCTEST: gi|11274392|gb|BF324745.1|BF324745
genomic: GAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgtta ... ggatatgcagTTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCT
EST: TTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGT TTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCT
genomic: TTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgtta ... ggatatgcagTTATGTAGGCAACATTCATCCCCAGGTTACAGATTCCCTTCTTCAAGAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAGAGCCTATCTTGAGTGGAAATCTGCCACCTGGCTTTGATTCGAGTTCATGCCGCAGTGTgtgagtgttaatagacattttattttcatttttttaaaattaacatattcgactgttcttttgtttattttgatttaatcatttttttcttccagtttag
- - - - - - - AGTGGA