Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTACTTTTCCCTCTGAAAATGAGTGCCACAAGCTCACTGAAAAAGGCTTCCTGCCCAGGATTGGAATGCAGTACCACTGGAAAAACCGTAACTACAAAAAgtgactcatccatcttattagctctttctattttggcagtcttgctgtttttacatatagctttagacttttgctgttttatgttgccag

Basic information

species Glycine max
transcript GLYMA17G00490.2
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G00490.2 (Glycine max), 5'ss of exon 2
lower sequence: AT2G23390.1 (Arabidopsis thaliana), 5'ss of exon 5
TTACTTTTCCCTCTGAAAATGAGTGCCACAAGCTCACTGAAAAAGGCTTCCTGCCCAGGATTGGAATGCAGTACCACTGGAAAAACCGTAACTACAAAAAgtgactcatccatcttattagctctttctattttggcagtcttgctgtttttacatatagctttagacttttgctgttttatgttgccag--------------
|||| ||||| |||| |  ||||||  ||||  | |  || |||||||||   |  ||||||||||||||||||||||||||||| ||| | || ||||||| | | |      ||   ||    ||   | ||  || |       ||   |    | ||| |    ||||| |  ||| | ||   |               
TTACATTTCCGTCTGGAGCTGAGTGGGACAAATTGAAAGAGAAAGGCTTCTCACAAAGGATTGGAATGCAGTACCACTGGAAAAATCGTGATTATAAAAAgtaattgaagttagttgccagtatattagttcttaacaatgactggattggaagtagttgctattatattttgttcatttttttttttatctctaatacttcag