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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGAGCTACAGGAACATAGAACAAACATACATGGGGCTGCCGCTACTTTCTTCTGCATTATGGGATCCTTCTCATAACTgtgagttacccttttcttttaatcttcttttattacattttacttttaacaattaaatgtcattcaacaaggggagcaacaacaactctatctgattttaatgtgattttttatttgcag

Basic information

species Glycine max
transcript GLYMA16G33060.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7686375|gb|AW757023.1|AW757023
EST:     CATGGGGCTGCCGCTACTTTCTTCTGCATTATGGGATCCTTCTCATAACT                         GTGTTTCCTCCAGTGTGGAGTTTATCAGGCCCCATCTATCAGCTTCTAAGT
genomic: CATGGGGCTGCCGCTACTTTCTTCTGCATTATGGGATCCTTCTCATAACTgtgagttacc ... ttatttgcagGTGTTTCCTCCAGTGTGGAGTTTATCAGGCCCCTTCTATCAGCTTCTAAGT
EST: gi|213608138|gb|DB963040.1|DB963040
EST:     CATGGGGCTGCCGCTACTTTCTTCTGCATTATGGGATCCTTCTCATAACT                         GTGTTTCCCCCAGTGTGGAGTTTATCAGGCCCCATCTATCAGCTTCTAAGT
genomic: CATGGGGCTGCCGCTACTTTCTTCTGCATTATGGGATCCTTCTCATAACTgtgagttacc ... ttatttgcagGTGTTTCCTCCAGTGTGGAGTTTATCAGGCCCCTTCTATCAGCTTCTAAGT