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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATAATCTCTTTGGTTCCATTCCCATTAAACTAGCTGATCTTCCTTCACTGCAAGTTCTGGATGTTCACAATAATACTCTCTCGGGGAATGTACCTCCTGgtaataatgatgctactcctttcattttattttattgctactgtccatttcttcattgatatgttttgttttatcattgaaaatgttcaaactaaaataagtttattttgctttccttggtttaatgaag

Basic information

species Glycine max
transcript GLYMA16G33010.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192326556|gb|FK018833.1|FK018833
EST:     CAAGTTCTGGATGTTCACAATAATAACTCTCTCGGGGAATGTACCTCCTG                         CTCTAAAGAGACTAGAGGAAGGATTTGTGTTTGAACATAATATGGGGTTAT
genomic: CAAGTTCTGGATGTTCACAATAAT-ACTCTCTCGGGGAATGTACCTCCTGgtaataatga ... tttaatgaagCTCTAAAGAGACTAGAGGAAGGATTTGTGTTTGAACATAATATGGGGTTAT
EST: gi|208255381|gb|GE052712.1|GE052712
EST:     AGTTCTGGATGTTTCACAATAATACTCTCTCGGGGAATGTACCTCCTG                         CTCTAAAGAGACTAGAGGAAGGATTTGTGTTTGAACATAATATGGGGTTAT
genomic: AGTTCTGGATG-TTCACAATAATACTCTCTCGGGGAATGTACCTCCTGgtaataatga ... tttaatgaagCTCTAAAGAGACTAGAGGAAGGATTTGTGTTTGAACATAATATGGGGTTAT