1 5' 3' | 2 5' 3' | 3 5' 3' |
AGAGAAGAGGTTGTTAGAGAGAAGAAAGAATGCTAAGATGGAGAAAGCTGCAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGGgtatgtattatgcttgctattgatattactattattattttttttgtgaattttttcttttcattttcgaacacttaattatgattgaggtgagattgtattaaatgcttgagtagttggaagctgataagtgattggaattggttag
species | Glycine max |
transcript | GLYMA16G32290.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACAEST: gi|254320245|gb|GR829433.1|GR829433
genomic: CAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGGgtatgtatta ... aattggttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACA
EST: ACTTGCAGGGAGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACAEST: gi|254320244|gb|GR829432.1|GR829432
genomic: ACTTGCAGGGAGGgtatgtatta ... aattggttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACA
EST: CAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACAEST: gi|7588829|gb|AW704616.1|AW704616
genomic: CAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGGgtatgtatta ... aattggttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACA
EST: CAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACA
genomic: CAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGGgtatgtatta ... aattggttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAAAGTTGTGGAAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAGAAGAGGTTGTTAGAGAGAAGAAAGAATGCTAAGATGGAGAAAGCTGCAAAGTCGATCTCAGAAATCAGCTTGGAAATAGATAGACTTGCAGGGAGGgtatgtattatgcttgctattgatattactattattattttttttgtgaattttttcttttcattttcgaacacttaattatgattgaggtgagattgtattaaatgcttgagtagttggaagctgataagtgattggaattggttag
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