Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|16348491|gb|BI974086.1|BI974086EST: CAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGGAAACA
genomic: CAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGGgtatgtatta ... aattagttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGGAAACA
EST:
gi|254333908|gb|GR848826.1|GR848826EST: CAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGG
genomic: CAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGGgtatgtatta ... aattagttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGG
EST:
gi|4397500|gb|AI496497.1|AI496497EST: CAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGG GTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGGAAACA
genomic: CAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGGgtatgtatta ... aattagttagGTATCAGCCTTTGAGTCAATTATTAGCAAAGGTGGGAGAGTTGTGGAAACA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAGAAGAGGTTGTTAGAGAGAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAGTCGATCTCAGAAATCAGCTTGGAAGTAGATAGGCTTGCAGGACGGgtatgtattatggttattaatttgttttaatgttttttgaatttttccttataattttcaagcacttaattatgagtgaggtgggattgtattaaatgcttgagtagttggaagctgataagtgattggaattagttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG