Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|214005626|gb|DB984634.1|DB984634EST: TGCACAAAGTTCCTGGAGCTCTAGTAGTAAACATTGGAGATCTGCTACAG CTAATATCCAATGACAAATTCAAAAGTGTGGAGCACCGTGTGCTTGCAAAC
genomic: TTCCCCCTGTTCCTGGAGCTCTAGTAGTAAACATTGGAGATCTGCTACAGgtaacttcat ... aaaattgcagCTAATATCCAATGACAAATTCAAAAGTGTGGAGCACCGTGTGCTTGCAAAC
EST:
gi|6667815|gb|AW279266.1|AW279266EST: TTCCCCCTGTTCCTGGAGCTCTAGTAGTAAACATTGGAGATCTGCTACAG CTAATATCCAATGACAAATTCAAAAGTGTGGAGCACCGTGTGCTTGCAAAC
genomic: TTCCCCCTGTTCCTGGAGCTCTAGTAGTAAACATTGGAGATCTGCTACAGgtaacttcat ... aaaattgcagCTAATATCCAATGACAAATTCAAAAGTGTGGAGCACCGTGTGCTTGCAAAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGATCACATTGGAGGGCTCCAAGTTTTGGGCCCTTATGGATGGGTTGATGTTCCCCCTGTTCCTGGAGCTCTAGTAGTAAACATTGGAGATCTGCTACAGgtaacttcattctattttttctcttttactagtcaaggaatgaaacataaaatgagtctggtgtaagaactacttatctttctacatgctaagttgtatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC