1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTGATCAAGCGACTTCAGGATTGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaagcaaaaaatcttctttttatttgcttatataattttttactagaaaattcttaatctgactgatatcaaatggtccttcttattgcatatt...
species | Glycine max |
transcript | GLYMA16G31990.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAA GGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAAEST: gi|298197148|gb|HO041891.1|HO041891
genomic: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaag ... tgcgttgtagGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
EST: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAA GGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAAEST: gi|192328311|gb|FK020022.1|FK020022
genomic: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaag ... tgcgttgtagGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
EST: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAA GGGATGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAAEST: gi|13563106|gb|BG551326.1|BG551326
genomic: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaag ... tgcgttgtagGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
EST: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAA GGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAAEST: gi|13480069|gb|BG509412.1|BG509412
genomic: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaag ... tgcgttgtagGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
EST: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAA GGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAAEST: gi|15204601|gb|BI427369.1|BI427369
genomic: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaag ... tgcgttgtagGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
EST: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAA GGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
genomic: TGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaag ... tgcgttgtagGGGACGTGTAAGGTGGGATGAGGCTAATATTGGAGAAATTGAGGCAAACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGATCAAGCGACTTCAGGATTGCCTTGCATACTTTGGTGTTTGAAGAGCTAATCTGTCTACCAAAATGAAgtaatgcaagcaaaaaatcttctttttatttgcttatataattttttactagaaaattcttaatctgactgatatcaaatggtccttcttattgcatatt
- - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcaaaaaa