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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCCTTGTTTACAATGGAAATGACACCTTATTTGAGTCAACTGGTCTTTATGGGAAGgtaatattactcatcttttcctccattgccttttttttctgttattttaaatgattttcattagctttgtgcattccatttttccattacacagttggag...

Basic information

species Glycine max
transcript GLYMA16G29760.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G29760.2 (Glycine max), 5'ss of exon 2
lower sequence: PP1S51_54V6.1 (Physcomitrella patens), 5'ss of exon 2
GGCCTTGTTTACAATGGAAATGACACCTTATTTGAGTCAACTGGTCTTTATGGGAAGgtaatattactcatcttttcctccattgccttttttttctgttattttaaatgattttcattagctttgtgcattcc--atttttccattacacagttggag
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GGACTATTTTACGATGGAAATGACACATTTTATGAGTCAACCGGTCTTTATGGCAGGgtgaggttg-tcttcctgatcacgaatatcaaatcctcatagc-ctttgtgtgcatttcatgctgttactttattactgaagttttggctatgttgtttaaa