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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTCTGATTCTGATCGAAACCCGCGCCATGGCCATGTTCGATTCCATCTTCAACAAAGGCTTTAAGGCTGCCAAATGgtactgtttgtttattttgtttgatttttttgtatataatctggggtttaatttttcttcttgcaattgtgtattttgtatgctttgaaatgaatttaat...

Basic information

species Glycine max
transcript GLYMA16G27420.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37994616|gb|CF806293.1|CF806293
EST:     ATGGCCATGTTCGATTCCATCTTCAACAAAGGCTTTAAGGCTGCCAAATG                         TAAAACACTGCTGAAGTTGACAATTCCACGTATAAAGCTTCTAAGAAACAG
genomic: ATGGCCATGTTCGATTCCATCTTCAACAAAGGCTTTAAGGCTGCCAAATGgtactgtttg ... atactttcagTAAAACACTGCTGAAGTTGACAATTCCACGTATAAAGCTTCTAAGAAACAG
EST: gi|9564471|gb|BE473980.1|BE473980
EST:     ATGGCCATGTTCGATTCCATCTTCAACAAAGGCTTTAAGGCTGCCAAATG                         TAAAACACTGCTGAAGTTGACAATTCCACGTATAAAGCTTCTAAGAAACAG
genomic: ATGGCCATGTTCGATTCCATCTTCAACAAAGGCTTTAAGGCTGCCAAATGgtactgtttg ... atactttcagTAAAACACTGCTGAAGTTGACAATTCCACGTATAAAGCTTCTAAGAAACAG