Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|151404272|gb|EV274082.1|EV274082EST: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAG GCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAGGAAGATGGCCTTG
genomic: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAGgtaccacttc ... tattttgcagGCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAGGAAGATGGCCTTG
EST:
gi|22930292|gb|BU547431.1|BU547431EST: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAG GCAGTTGAACNNNGAGGTTTGTTGAAACTAATGCTCAGGAAGATGGCCTTG
genomic: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAGgtaccacttc ... tattttgcagGCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAGGAAGATGGCCTTG
EST:
gi|254347633|gb|GR853882.1|GR853882EST: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAG GCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAG-AAGATGGGCCTT
genomic: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAGgtaccacttc ... tattttgcagGCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAGGAAGATGG-CCTT
EST:
gi|151399258|gb|EV269129.1|EV269129EST: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAG GCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAGGAAGATGGCCTTG
genomic: TTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAGgtaccacttc ... tattttgcagGCAGTTGAACTTGGAGGTTTGTTGAAACTAATGCTCAGGAAGATGGCCTTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTTCTTTTCACTGGTTCCTTTTGCTGCTACTTTTCCTTTTGAGATATGGATTGTTCCTCGGTACCACACTGCTCACTTCCATGAATTGGATGCTGAAAAGgtaccacttctttatttgcaaagtcttgttgatgcttaagtgccaaacatttagtttgatctcaatataatgcatcttatatgaggtgtgaattaaaggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG