Sequence
atgc intronic sequence ATGC exonic sequenceTAGAGGAAGAGCTCCAAAGGGTGAGAAGACAAATTGGGTTATGCATGAATTCAGATTGGATGGCAAATTCGCATGTTACAACCTTCCCAAGGCTGCAAAGgtaattaaatactaattactaattaactacctcactttctctctcttttgatttttttatgacattttttctatggattttgaggaagctgaaaaaaggt...
Basic information
species | Glycine max |
transcript | GLYMA16G26810.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|15203882|gb|BI426650.1|BI426650EST: TCAGATTGGATGGCAAATTCGCATGTTACAACCTTCCCAAGGCTGCAAAG GATGAATGGGTTGTGTGCAAGGTTTTCCACAAGAGCAGCACTACTACTACA
genomic: TCAGATTGGATGGCAAATTCGCATGTTACAACCTTCCCAAGGCTGCAAAGgtaattaaat ... attatttcagGATGAATGGGTTGTGTGCAAGGTTTTCCACAAGAGCAGCACTACTACTACA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TAGAGGAAGAGCTCCAAAGGGTGAGAAGACAAATTGGGTTATGCATGAATTCAGATTGGATGGCAAATTCGCATGTTACAACCTTCCCAAGGCTGCAAAGgtaattaaatactaattactaattaactacctcactttctctctcttttgatttttttatgacattttttctatggattttgaggaagctgaaaaaaggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgaaaaaa