1 5' 3' | 2 5' 3' | 3 5' 3' |
GTGAAGGTGAAAAGAAGGCGCCGAATCAGGTTGCTGGGGAGATTCTATCGTTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttactgtttcattcttgtattgtgattgttcttgcttgctttagggtaggtttagttgttggaagagaaaaaattggaagagattgagaagaaat...
species | Glycine max |
transcript | GLYMA16G26340.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACGATCAC GTTTGAAGGAATGATGGCTCCAAGCEST: gi|192302487|gb|FG994809.1|FG994809
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGC
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCAC GTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTTEST: gi|31309305|gb|CD394508.1|CD394508
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCAC GTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTTEST: gi|31308755|gb|CD393958.1|CD393958
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCAC GTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTTEST: gi|20811369|gb|BQ295847.1|BQ295847
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCAC GTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTTEST: gi|151399988|gb|EV269859.1|EV269859
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCAC GTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTTEST: gi|31561633|gb|CD487471.1|CD487471
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
EST: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCAC GTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
genomic: TTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttact ... taccttgcagGTTTGAAGGAATGATGGTTCCAAGCAGAGGTCAAGCAGCGCTATTAACTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGAAGGTGAAAAGAAGGCGCCGAATCAGGTTGCTGGGGAGATTCTATCGTTCTTCACTCGTAACAATTTTGCAGTGACTGACAGAGGAGAGACAATCACgtatgttactgtttcattcttgtattgtgattgttcttgcttgctttagggtaggtttagttgttggaagagaaaaaattggaagagattgagaagaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gggtagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agaagaaa