1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAAAAAAAAAAAATTAGGGTTTGATGGCTGACCAAGGATTGGAAGGGAGCCAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCAgtgagtatctgttttttgatgaacaaattttcactttctctttttatttggtttcatttgcgagcttcagatggttgaatcttaagttgtggggttaccc...
species | Glycine max |
transcript | GLYMA16G25450.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCA AAATATTGTGTCCACAGTCAATTTGGACTGTAAGTTGGACCTCAAAACAATEST: gi|120530268|gb|EH258402.1|EH258402
genomic: CAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCAgtgagtatct ... gtacatccagAAATATTGTGTCCACAGTCAATTTGGACTGTAAGTTGGACCTCAAAACAAT
EST: CAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCA AAATATTGTGTCCACAGTCAATTTGGACTGTAAGTTGGACCTCAAAACAATEST: gi|14258923|gb|BG881840.1|BG881840
genomic: CAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCAgtgagtatct ... gtacatccagAAATATTGTGTCCACAGTCAATTTGGACTGTAAGTTGGACCTCAAAACAAT
EST: CAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCA AAATATTGTGTCCACAGTCAATTTGGACTGTAAGTTGGACCTCAAAACAAT
genomic: CAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCAgtgagtatct ... gtacatccagAAATATTGTGTCCACAGTCAATTTGGACTGTAAGTTGGACCTCAAAACAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAAAAAAAAAAATTAGGGTTTGATGGCTGACCAAGGATTGGAAGGGAGCCAGCCGGTGGATCTACAGAAGCATCCTTCTGGGATCGTGCCTACCCTTCAgtgagtatctgttttttgatgaacaaattttcactttctctttttatttggtttcatttgcgagcttcagatggttgaatcttaagttgtggggttaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC