Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192297668|gb|FG989587.1|FG989587EST: TTACTTTCTTCAGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAGCG GTTAGTTGGAAAGACTACCCAATTGGAAGGTGAGAAAATGCAGAAAGAGGC
genomic: TTACTTTCTTCAGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAGCGgtaaacatat ... tcttgagcagGTTAGTTGGAAAGACTACCCAATTGGAAGGTGAGAAAATGCAGAAAGAGGC
EST:
gi|151400119|gb|EV269933.1|EV269933EST: TTACTTTCTTCAGAGAAGCAACTCCAAACTATTGAGAAGCTGTTTGAGCG GTTAGTTGGAAAGACTACCCAATTGGAAGGTGAGAAAATGCAGAAAGAGGC
genomic: TTACTTTCTTCAGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAGCGgtaaacatat ... tcttgagcagGTTAGTTGGAAAGACTACCCAATTGGAAGGTGAGAAAATGCAGAAAGAGGC
EST:
gi|10847849|gb|BF071622.1|BF071622EST: TTACTTTCTTCAGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAGCG GTTAGTTGGAAAGACTACCCAATTGGAAGGTGAGAAAATGCAGAAAGAGGC
genomic: TTACTTTCTTCAGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAGCGgtaaacatat ... tcttgagcagGTTAGTTGGAAAGACTACCCAATTGGAAGGTGAGAAAATGCAGAAAGAGGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGAGTCTCTAAAGTCATATGTTAGTAGTCTAATCACAGTTAGAGAAACCTTACTTTCTTCAGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAGCGgtaaacatatattgttatgcaattgcttctattaaatgtcttgataataatctagtgtttggcctgcatcgaagtgtttgacatagatgcaatggcatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT