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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCTTGCCTGCTCAGAATTCACCACGTGTCTCGTTCCAGCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACGgttagttttactttacctttaactttgtttcgttctctctctggaaatggtactttttgttattttaattctctttttgttcttctttattag

Basic information

species Glycine max
transcript GLYMA16G19540.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213588323|gb|DB967809.1|DB967809
EST:     GCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACG                         GGGGTTCTGGCTATTGCAAATTCGGTTGGAGCACAGGGGCCTCTCCTTCGG
genomic: GCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACGgttagtttta ... tctttattagGGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGG
EST: gi|19270787|gb|BM887043.1|BM887043
EST:     GCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACG                         GGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGG
genomic: GCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACGgttagtttta ... tctttattagGGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGG
EST: gi|213591717|gb|DB969817.1|DB969817
EST:     GCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACG                         GGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGG
genomic: GCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACGgttagtttta ... tctttattagGGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGG