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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGGCTCTAACAACTTTGAAATTAATTACATAGTGATGAAAGCCACCCATGATCTTGGCTTTACAAACTCGCTTTAGCATAAGCAGAAATCAACGAATTgtaagtaacactggtttgtagactattccttcatccttatatttggttttcagttccatttcataactcatttttttttttgggatcaacaaatgttagt...

Basic information

species Glycine max
transcript GLYMA16G19450.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|57574370|gb|CX547345.1|CX547345
EST:     TGATCTTGGC-TTACAAACTCGCTTTAGCATAAGCAGAAATCAACGAATT                         GAGTTTCTTTTCTTCAAATATGGATGAGAACATGAAACAGTTCCAAAAGAA
genomic: TGATCTTGGCTTTACAAACTCGCTTTAGCATAAGCAGAAATCAACGAATTgtaagtaaca ... aattttacagGAGTTTCTTTTCTTCAAATATGGATGAGAACATGAAACAGTTCCAAAAGAA
EST: gi|4260421|gb|AI416917.1|AI416917
EST:     TGATCTTGGCTTTACAAACTCGCTNTAGCATAAGCAGAAATCAACGAATT                         GAGTTTCTTTTCTTCAAATATGGATGAGAACATGAAACAG
genomic: TGATCTTGGCTTTACAAACTCGCTTTAGCATAAGCAGAAATCAACGAATTgtaagtaaca ... aattttacagGAGTTTCTTTTCTTCAAATATGGATGAGAACATGAAACAG
EST: gi|192297436|gb|FG989500.1|FG989500
EST:     TGATCTTGGCTTTACAAACTCGCTTTAGCATAAGCAGAAATCAACGAATT                         GAGTTTCTTTTCTTCAAATATGGATGAGAACATGAAACAGTTCCAAAAGAA
genomic: TGATCTTGGCTTTACAAACTCGCTTTAGCATAAGCAGAAATCAACGAATTgtaagtaaca ... aattttacagGAGTTTCTTTTCTTCAAATATGGATGAGAACATGAAACAGTTCCAAAAGAA