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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTAGGCTATAAATGGATTACAAAGTTTCTTGCCCTTGGTTGTTATGCAGTACTCCTTTTCCCAGGCTTTATTCAAGgtctgaattcagtggtctataacattattctcattcgaataattatgcatgtccagattctgatttgaaatgcattagtatcacccatcaatatcacatatccattgcccttctgttttatag

Basic information

species Glycine max
transcript GLYMA16G18930.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G18930.1 (Glycine max), 5'ss of exon 2
lower sequence: Vv01s0011g02530.t01 (Vitis vinifera), 5'ss of exon 2
GGTAGGCTATAAATGGATTACAAAGTTTCTTGCCCTTGGTTGTTATGCAGTACTCCTTTTCCCAGGCTTTATTCAAGgtctgaa---ttcagtggtctataac---attattctcattcgaataattatgcatgtccagattctgatttgaaatgcattagtatcacccatcaatatcacatatccattgcccttctgttttatag
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GGTAGGCTACAGATGGATTACAAGATTTCTTGCACTTGGTTGTTATGCCTTACTACTTATGCCAGGTTTTATTCAAGgtctgtagcattcattgatctgtagtcaaatccttttttttttttcatgcatcactgtctaaaat-tgcttgcaagtaatttaatctctatcactgtgttt----------------------------