1 5' 3' | 2 5' 3' | 3 5' 3' |
GTTGGAGCTGGTTGTGGCATTGGATTCAATGTAGGCATCACTTTTGCTGGTGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggcagtcattaagtgaaagccattgattgctatcttaaagtgtcacttataaaagttagatcagtttttgtatgcattttggggtaatcaggaa...
species | Glycine max |
transcript | GLYMA16G17640.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATG GGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAGEST: gi|151398487|gb|EV268358.1|EV268358
genomic: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggca ... attattgcagGGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAG
EST: TGTTGGAGTTGGCCTACCTGCTAGTTTTATCTTTGAAGGTCCATATAATG GGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAGEST: gi|6481677|gb|AW200948.1|AW200948
genomic: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggca ... attattgcagGGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAG
EST: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATG GGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTTGCAA-GAGAAEST: gi|298163703|gb|HO012436.1|HO012436
genomic: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggca ... attattgcagGGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTT-GCAAAGAGAA
EST: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATG GGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAGEST: gi|298190599|gb|HO032720.1|HO032720
genomic: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggca ... attattgcagGGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAG
EST: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATG GGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAGEST: gi|31473717|gb|CD415745.1|CD415745
genomic: TGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggca ... attattgcagGGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAG
EST: GTTGGAGATTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATG GGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAG
genomic: GTTGGAG-TTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggca ... attattgcagGGGTTAGCTGGATTGGAAATTTACCTTGTATCTCTGACTTGCAAAGAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGAGCTGGTTGTGGCATTGGATTCAATGTAGGCATCACTTTTGCTGGTGTTGGAGTTGGCCTACCTGCTAATTTTATCTTTGAAGGTCCATATAATGgtaaatggcagtcattaagtgaaagccattgattgctatcttaaagtgtcacttataaaagttagatcagtttttgtatgcattttggggtaatcaggaa
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG